#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
import sys
import warnings
import random
if sys.version >= '3':
basestring = unicode = str
long = int
from functools import reduce
else:
from itertools import imap as map
from pyspark.rdd import RDD, _load_from_socket, ignore_unicode_prefix
from pyspark.serializers import BatchedSerializer, PickleSerializer, UTF8Deserializer
from pyspark.storagelevel import StorageLevel
from pyspark.traceback_utils import SCCallSiteSync
from pyspark.sql import since
from pyspark.sql.types import _parse_datatype_json_string
from pyspark.sql.column import Column, _to_seq, _to_java_column
from pyspark.sql.readwriter import DataFrameWriter
from pyspark.sql.types import *
__all__ = ["DataFrame", "SchemaRDD", "DataFrameNaFunctions", "DataFrameStatFunctions"]
[docs]class DataFrame(object):
"""A distributed collection of data grouped into named columns.
A :class:`DataFrame` is equivalent to a relational table in Spark SQL,
and can be created using various functions in :class:`SQLContext`::
people = sqlContext.read.parquet("...")
Once created, it can be manipulated using the various domain-specific-language
(DSL) functions defined in: :class:`DataFrame`, :class:`Column`.
To select a column from the data frame, use the apply method::
ageCol = people.age
A more concrete example::
# To create DataFrame using SQLContext
people = sqlContext.read.parquet("...")
department = sqlContext.read.parquet("...")
people.filter(people.age > 30).join(department, people.deptId == department.id)) \
.groupBy(department.name, "gender").agg({"salary": "avg", "age": "max"})
.. note:: Experimental
.. versionadded:: 1.3
"""
def __init__(self, jdf, sql_ctx):
self._jdf = jdf
self.sql_ctx = sql_ctx
self._sc = sql_ctx and sql_ctx._sc
self.is_cached = False
self._schema = None # initialized lazily
self._lazy_rdd = None
@property
@since(1.3)
def rdd(self):
"""Returns the content as an :class:`pyspark.RDD` of :class:`Row`.
"""
if self._lazy_rdd is None:
jrdd = self._jdf.javaToPython()
self._lazy_rdd = RDD(jrdd, self.sql_ctx._sc, BatchedSerializer(PickleSerializer()))
return self._lazy_rdd
@property
@since("1.3.1")
def na(self):
"""Returns a :class:`DataFrameNaFunctions` for handling missing values.
"""
return DataFrameNaFunctions(self)
@property
@since(1.4)
def stat(self):
"""Returns a :class:`DataFrameStatFunctions` for statistic functions.
"""
return DataFrameStatFunctions(self)
@ignore_unicode_prefix
@since(1.3)
[docs] def toJSON(self, use_unicode=True):
"""Converts a :class:`DataFrame` into a :class:`RDD` of string.
Each row is turned into a JSON document as one element in the returned RDD.
>>> df.toJSON().first()
u'{"age":2,"name":"Alice"}'
"""
rdd = self._jdf.toJSON()
return RDD(rdd.toJavaRDD(), self._sc, UTF8Deserializer(use_unicode))
[docs] def saveAsParquetFile(self, path):
"""Saves the contents as a Parquet file, preserving the schema.
.. note:: Deprecated in 1.4, use :func:`DataFrameWriter.parquet` instead.
"""
warnings.warn("saveAsParquetFile is deprecated. Use write.parquet() instead.")
self._jdf.saveAsParquetFile(path)
@since(1.3)
[docs] def registerTempTable(self, name):
"""Registers this RDD as a temporary table using the given name.
The lifetime of this temporary table is tied to the :class:`SQLContext`
that was used to create this :class:`DataFrame`.
>>> df.registerTempTable("people")
>>> df2 = sqlContext.sql("select * from people")
>>> sorted(df.collect()) == sorted(df2.collect())
True
"""
self._jdf.registerTempTable(name)
[docs] def registerAsTable(self, name):
"""
.. note:: Deprecated in 1.4, use :func:`registerTempTable` instead.
"""
warnings.warn("Use registerTempTable instead of registerAsTable.")
self.registerTempTable(name)
[docs] def insertInto(self, tableName, overwrite=False):
"""Inserts the contents of this :class:`DataFrame` into the specified table.
.. note:: Deprecated in 1.4, use :func:`DataFrameWriter.insertInto` instead.
"""
warnings.warn("insertInto is deprecated. Use write.insertInto() instead.")
self.write.insertInto(tableName, overwrite)
[docs] def saveAsTable(self, tableName, source=None, mode="error", **options):
"""Saves the contents of this :class:`DataFrame` to a data source as a table.
.. note:: Deprecated in 1.4, use :func:`DataFrameWriter.saveAsTable` instead.
"""
warnings.warn("insertInto is deprecated. Use write.saveAsTable() instead.")
self.write.saveAsTable(tableName, source, mode, **options)
@since(1.3)
[docs] def save(self, path=None, source=None, mode="error", **options):
"""Saves the contents of the :class:`DataFrame` to a data source.
.. note:: Deprecated in 1.4, use :func:`DataFrameWriter.save` instead.
"""
warnings.warn("insertInto is deprecated. Use write.save() instead.")
return self.write.save(path, source, mode, **options)
@property
@since(1.4)
def write(self):
"""
Interface for saving the content of the :class:`DataFrame` out into external storage.
:return: :class:`DataFrameWriter`
"""
return DataFrameWriter(self)
@property
@since(1.3)
def schema(self):
"""Returns the schema of this :class:`DataFrame` as a :class:`types.StructType`.
>>> df.schema
StructType(List(StructField(age,IntegerType,true),StructField(name,StringType,true)))
"""
if self._schema is None:
try:
self._schema = _parse_datatype_json_string(self._jdf.schema().json())
except AttributeError as e:
raise Exception(
"Unable to parse datatype from schema. %s" % e)
return self._schema
@since(1.3)
[docs] def printSchema(self):
"""Prints out the schema in the tree format.
>>> df.printSchema()
root
|-- age: integer (nullable = true)
|-- name: string (nullable = true)
<BLANKLINE>
"""
print(self._jdf.schema().treeString())
@since(1.3)
[docs] def explain(self, extended=False):
"""Prints the (logical and physical) plans to the console for debugging purpose.
:param extended: boolean, default ``False``. If ``False``, prints only the physical plan.
>>> df.explain()
Scan PhysicalRDD[age#0,name#1]
>>> df.explain(True)
== Parsed Logical Plan ==
...
== Analyzed Logical Plan ==
...
== Optimized Logical Plan ==
...
== Physical Plan ==
...
"""
if extended:
print(self._jdf.queryExecution().toString())
else:
print(self._jdf.queryExecution().executedPlan().toString())
@since(1.3)
[docs] def isLocal(self):
"""Returns ``True`` if the :func:`collect` and :func:`take` methods can be run locally
(without any Spark executors).
"""
return self._jdf.isLocal()
@since(1.3)
[docs] def show(self, n=20, truncate=True):
"""Prints the first ``n`` rows to the console.
:param n: Number of rows to show.
:param truncate: Whether truncate long strings and align cells right.
>>> df
DataFrame[age: int, name: string]
>>> df.show()
+---+-----+
|age| name|
+---+-----+
| 2|Alice|
| 5| Bob|
+---+-----+
"""
print(self._jdf.showString(n, truncate))
def __repr__(self):
return "DataFrame[%s]" % (", ".join("%s: %s" % c for c in self.dtypes))
@since(1.3)
[docs] def count(self):
"""Returns the number of rows in this :class:`DataFrame`.
>>> df.count()
2
"""
return int(self._jdf.count())
@ignore_unicode_prefix
@since(1.3)
[docs] def collect(self):
"""Returns all the records as a list of :class:`Row`.
>>> df.collect()
[Row(age=2, name=u'Alice'), Row(age=5, name=u'Bob')]
"""
with SCCallSiteSync(self._sc) as css:
port = self._sc._jvm.PythonRDD.collectAndServe(self._jdf.javaToPython().rdd())
return list(_load_from_socket(port, BatchedSerializer(PickleSerializer())))
@ignore_unicode_prefix
@since(1.3)
[docs] def limit(self, num):
"""Limits the result count to the number specified.
>>> df.limit(1).collect()
[Row(age=2, name=u'Alice')]
>>> df.limit(0).collect()
[]
"""
jdf = self._jdf.limit(num)
return DataFrame(jdf, self.sql_ctx)
@ignore_unicode_prefix
@since(1.3)
[docs] def take(self, num):
"""Returns the first ``num`` rows as a :class:`list` of :class:`Row`.
>>> df.take(2)
[Row(age=2, name=u'Alice'), Row(age=5, name=u'Bob')]
"""
return self.limit(num).collect()
@ignore_unicode_prefix
@since(1.3)
[docs] def map(self, f):
""" Returns a new :class:`RDD` by applying a the ``f`` function to each :class:`Row`.
This is a shorthand for ``df.rdd.map()``.
>>> df.map(lambda p: p.name).collect()
[u'Alice', u'Bob']
"""
return self.rdd.map(f)
@ignore_unicode_prefix
@since(1.3)
[docs] def flatMap(self, f):
""" Returns a new :class:`RDD` by first applying the ``f`` function to each :class:`Row`,
and then flattening the results.
This is a shorthand for ``df.rdd.flatMap()``.
>>> df.flatMap(lambda p: p.name).collect()
[u'A', u'l', u'i', u'c', u'e', u'B', u'o', u'b']
"""
return self.rdd.flatMap(f)
@since(1.3)
[docs] def mapPartitions(self, f, preservesPartitioning=False):
"""Returns a new :class:`RDD` by applying the ``f`` function to each partition.
This is a shorthand for ``df.rdd.mapPartitions()``.
>>> rdd = sc.parallelize([1, 2, 3, 4], 4)
>>> def f(iterator): yield 1
>>> rdd.mapPartitions(f).sum()
4
"""
return self.rdd.mapPartitions(f, preservesPartitioning)
@since(1.3)
[docs] def foreach(self, f):
"""Applies the ``f`` function to all :class:`Row` of this :class:`DataFrame`.
This is a shorthand for ``df.rdd.foreach()``.
>>> def f(person):
... print(person.name)
>>> df.foreach(f)
"""
return self.rdd.foreach(f)
@since(1.3)
[docs] def foreachPartition(self, f):
"""Applies the ``f`` function to each partition of this :class:`DataFrame`.
This a shorthand for ``df.rdd.foreachPartition()``.
>>> def f(people):
... for person in people:
... print(person.name)
>>> df.foreachPartition(f)
"""
return self.rdd.foreachPartition(f)
@since(1.3)
[docs] def cache(self):
""" Persists with the default storage level (C{MEMORY_ONLY_SER}).
"""
self.is_cached = True
self._jdf.cache()
return self
@since(1.3)
[docs] def persist(self, storageLevel=StorageLevel.MEMORY_ONLY_SER):
"""Sets the storage level to persist its values across operations
after the first time it is computed. This can only be used to assign
a new storage level if the RDD does not have a storage level set yet.
If no storage level is specified defaults to (C{MEMORY_ONLY_SER}).
"""
self.is_cached = True
javaStorageLevel = self._sc._getJavaStorageLevel(storageLevel)
self._jdf.persist(javaStorageLevel)
return self
@since(1.3)
[docs] def unpersist(self, blocking=True):
"""Marks the :class:`DataFrame` as non-persistent, and remove all blocks for it from
memory and disk.
"""
self.is_cached = False
self._jdf.unpersist(blocking)
return self
@since(1.4)
[docs] def coalesce(self, numPartitions):
"""
Returns a new :class:`DataFrame` that has exactly `numPartitions` partitions.
Similar to coalesce defined on an :class:`RDD`, this operation results in a
narrow dependency, e.g. if you go from 1000 partitions to 100 partitions,
there will not be a shuffle, instead each of the 100 new partitions will
claim 10 of the current partitions.
>>> df.coalesce(1).rdd.getNumPartitions()
1
"""
return DataFrame(self._jdf.coalesce(numPartitions), self.sql_ctx)
@since(1.3)
[docs] def repartition(self, numPartitions):
"""Returns a new :class:`DataFrame` that has exactly ``numPartitions`` partitions.
>>> df.repartition(10).rdd.getNumPartitions()
10
"""
return DataFrame(self._jdf.repartition(numPartitions), self.sql_ctx)
@since(1.3)
[docs] def distinct(self):
"""Returns a new :class:`DataFrame` containing the distinct rows in this :class:`DataFrame`.
>>> df.distinct().count()
2
"""
return DataFrame(self._jdf.distinct(), self.sql_ctx)
@since(1.3)
[docs] def sample(self, withReplacement, fraction, seed=None):
"""Returns a sampled subset of this :class:`DataFrame`.
>>> df.sample(False, 0.5, 42).count()
1
"""
assert fraction >= 0.0, "Negative fraction value: %s" % fraction
seed = seed if seed is not None else random.randint(0, sys.maxsize)
rdd = self._jdf.sample(withReplacement, fraction, long(seed))
return DataFrame(rdd, self.sql_ctx)
@since(1.5)
[docs] def sampleBy(self, col, fractions, seed=None):
"""
Returns a stratified sample without replacement based on the
fraction given on each stratum.
:param col: column that defines strata
:param fractions:
sampling fraction for each stratum. If a stratum is not
specified, we treat its fraction as zero.
:param seed: random seed
:return: a new DataFrame that represents the stratified sample
>>> from pyspark.sql.functions import col
>>> dataset = sqlContext.range(0, 100).select((col("id") % 3).alias("key"))
>>> sampled = dataset.sampleBy("key", fractions={0: 0.1, 1: 0.2}, seed=0)
>>> sampled.groupBy("key").count().orderBy("key").show()
+---+-----+
|key|count|
+---+-----+
| 0| 3|
| 1| 8|
+---+-----+
"""
if not isinstance(col, str):
raise ValueError("col must be a string, but got %r" % type(col))
if not isinstance(fractions, dict):
raise ValueError("fractions must be a dict but got %r" % type(fractions))
for k, v in fractions.items():
if not isinstance(k, (float, int, long, basestring)):
raise ValueError("key must be float, int, long, or string, but got %r" % type(k))
fractions[k] = float(v)
seed = seed if seed is not None else random.randint(0, sys.maxsize)
return DataFrame(self._jdf.stat().sampleBy(col, self._jmap(fractions), seed), self.sql_ctx)
@since(1.4)
[docs] def randomSplit(self, weights, seed=None):
"""Randomly splits this :class:`DataFrame` with the provided weights.
:param weights: list of doubles as weights with which to split the DataFrame. Weights will
be normalized if they don't sum up to 1.0.
:param seed: The seed for sampling.
>>> splits = df4.randomSplit([1.0, 2.0], 24)
>>> splits[0].count()
1
>>> splits[1].count()
3
"""
for w in weights:
if w < 0.0:
raise ValueError("Weights must be positive. Found weight value: %s" % w)
seed = seed if seed is not None else random.randint(0, sys.maxsize)
rdd_array = self._jdf.randomSplit(_to_seq(self.sql_ctx._sc, weights), long(seed))
return [DataFrame(rdd, self.sql_ctx) for rdd in rdd_array]
@property
@since(1.3)
def dtypes(self):
"""Returns all column names and their data types as a list.
>>> df.dtypes
[('age', 'int'), ('name', 'string')]
"""
return [(str(f.name), f.dataType.simpleString()) for f in self.schema.fields]
@property
@since(1.3)
def columns(self):
"""Returns all column names as a list.
>>> df.columns
['age', 'name']
"""
return [f.name for f in self.schema.fields]
@ignore_unicode_prefix
@since(1.3)
[docs] def alias(self, alias):
"""Returns a new :class:`DataFrame` with an alias set.
>>> from pyspark.sql.functions import *
>>> df_as1 = df.alias("df_as1")
>>> df_as2 = df.alias("df_as2")
>>> joined_df = df_as1.join(df_as2, col("df_as1.name") == col("df_as2.name"), 'inner')
>>> joined_df.select(col("df_as1.name"), col("df_as2.name"), col("df_as2.age")).collect()
[Row(name=u'Alice', name=u'Alice', age=2), Row(name=u'Bob', name=u'Bob', age=5)]
"""
assert isinstance(alias, basestring), "alias should be a string"
return DataFrame(getattr(self._jdf, "as")(alias), self.sql_ctx)
@ignore_unicode_prefix
@since(1.3)
[docs] def join(self, other, on=None, how=None):
"""Joins with another :class:`DataFrame`, using the given join expression.
The following performs a full outer join between ``df1`` and ``df2``.
:param other: Right side of the join
:param on: a string for join column name, a list of column names,
, a join expression (Column) or a list of Columns.
If `on` is a string or a list of string indicating the name of the join column(s),
the column(s) must exist on both sides, and this performs an inner equi-join.
:param how: str, default 'inner'.
One of `inner`, `outer`, `left_outer`, `right_outer`, `semijoin`.
>>> df.join(df2, df.name == df2.name, 'outer').select(df.name, df2.height).collect()
[Row(name=None, height=80), Row(name=u'Alice', height=None), Row(name=u'Bob', height=85)]
>>> cond = [df.name == df3.name, df.age == df3.age]
>>> df.join(df3, cond, 'outer').select(df.name, df3.age).collect()
[Row(name=u'Bob', age=5), Row(name=u'Alice', age=2)]
>>> df.join(df2, 'name').select(df.name, df2.height).collect()
[Row(name=u'Bob', height=85)]
>>> df.join(df4, ['name', 'age']).select(df.name, df.age).collect()
[Row(name=u'Bob', age=5)]
"""
if on is not None and not isinstance(on, list):
on = [on]
if on is None or len(on) == 0:
jdf = self._jdf.join(other._jdf)
elif isinstance(on[0], basestring):
jdf = self._jdf.join(other._jdf, self._jseq(on))
else:
assert isinstance(on[0], Column), "on should be Column or list of Column"
if len(on) > 1:
on = reduce(lambda x, y: x.__and__(y), on)
else:
on = on[0]
if how is None:
jdf = self._jdf.join(other._jdf, on._jc, "inner")
else:
assert isinstance(how, basestring), "how should be basestring"
jdf = self._jdf.join(other._jdf, on._jc, how)
return DataFrame(jdf, self.sql_ctx)
@ignore_unicode_prefix
@since(1.3)
[docs] def sort(self, *cols, **kwargs):
"""Returns a new :class:`DataFrame` sorted by the specified column(s).
:param cols: list of :class:`Column` or column names to sort by.
:param ascending: boolean or list of boolean (default True).
Sort ascending vs. descending. Specify list for multiple sort orders.
If a list is specified, length of the list must equal length of the `cols`.
>>> df.sort(df.age.desc()).collect()
[Row(age=5, name=u'Bob'), Row(age=2, name=u'Alice')]
>>> df.sort("age", ascending=False).collect()
[Row(age=5, name=u'Bob'), Row(age=2, name=u'Alice')]
>>> df.orderBy(df.age.desc()).collect()
[Row(age=5, name=u'Bob'), Row(age=2, name=u'Alice')]
>>> from pyspark.sql.functions import *
>>> df.sort(asc("age")).collect()
[Row(age=2, name=u'Alice'), Row(age=5, name=u'Bob')]
>>> df.orderBy(desc("age"), "name").collect()
[Row(age=5, name=u'Bob'), Row(age=2, name=u'Alice')]
>>> df.orderBy(["age", "name"], ascending=[0, 1]).collect()
[Row(age=5, name=u'Bob'), Row(age=2, name=u'Alice')]
"""
if not cols:
raise ValueError("should sort by at least one column")
if len(cols) == 1 and isinstance(cols[0], list):
cols = cols[0]
jcols = [_to_java_column(c) for c in cols]
ascending = kwargs.get('ascending', True)
if isinstance(ascending, (bool, int)):
if not ascending:
jcols = [jc.desc() for jc in jcols]
elif isinstance(ascending, list):
jcols = [jc if asc else jc.desc()
for asc, jc in zip(ascending, jcols)]
else:
raise TypeError("ascending can only be boolean or list, but got %s" % type(ascending))
jdf = self._jdf.sort(self._jseq(jcols))
return DataFrame(jdf, self.sql_ctx)
orderBy = sort
def _jseq(self, cols, converter=None):
"""Return a JVM Seq of Columns from a list of Column or names"""
return _to_seq(self.sql_ctx._sc, cols, converter)
def _jmap(self, jm):
"""Return a JVM Scala Map from a dict"""
return _to_scala_map(self.sql_ctx._sc, jm)
def _jcols(self, *cols):
"""Return a JVM Seq of Columns from a list of Column or column names
If `cols` has only one list in it, cols[0] will be used as the list.
"""
if len(cols) == 1 and isinstance(cols[0], list):
cols = cols[0]
return self._jseq(cols, _to_java_column)
@since("1.3.1")
[docs] def describe(self, *cols):
"""Computes statistics for numeric columns.
This include count, mean, stddev, min, and max. If no columns are
given, this function computes statistics for all numerical columns.
.. note:: This function is meant for exploratory data analysis, as we make no \
guarantee about the backward compatibility of the schema of the resulting DataFrame.
>>> df.describe().show()
+-------+---+
|summary|age|
+-------+---+
| count| 2|
| mean|3.5|
| stddev|1.5|
| min| 2|
| max| 5|
+-------+---+
>>> df.describe(['age', 'name']).show()
+-------+---+-----+
|summary|age| name|
+-------+---+-----+
| count| 2| 2|
| mean|3.5| null|
| stddev|1.5| null|
| min| 2|Alice|
| max| 5| Bob|
+-------+---+-----+
"""
if len(cols) == 1 and isinstance(cols[0], list):
cols = cols[0]
jdf = self._jdf.describe(self._jseq(cols))
return DataFrame(jdf, self.sql_ctx)
@ignore_unicode_prefix
@since(1.3)
[docs] def head(self, n=None):
"""Returns the first ``n`` rows.
:param n: int, default 1. Number of rows to return.
:return: If n is greater than 1, return a list of :class:`Row`.
If n is 1, return a single Row.
>>> df.head()
Row(age=2, name=u'Alice')
>>> df.head(1)
[Row(age=2, name=u'Alice')]
"""
if n is None:
rs = self.head(1)
return rs[0] if rs else None
return self.take(n)
@ignore_unicode_prefix
@since(1.3)
[docs] def first(self):
"""Returns the first row as a :class:`Row`.
>>> df.first()
Row(age=2, name=u'Alice')
"""
return self.head()
@ignore_unicode_prefix
@since(1.3)
def __getitem__(self, item):
"""Returns the column as a :class:`Column`.
>>> df.select(df['age']).collect()
[Row(age=2), Row(age=5)]
>>> df[ ["name", "age"]].collect()
[Row(name=u'Alice', age=2), Row(name=u'Bob', age=5)]
>>> df[ df.age > 3 ].collect()
[Row(age=5, name=u'Bob')]
>>> df[df[0] > 3].collect()
[Row(age=5, name=u'Bob')]
"""
if isinstance(item, basestring):
jc = self._jdf.apply(item)
return Column(jc)
elif isinstance(item, Column):
return self.filter(item)
elif isinstance(item, (list, tuple)):
return self.select(*item)
elif isinstance(item, int):
jc = self._jdf.apply(self.columns[item])
return Column(jc)
else:
raise TypeError("unexpected item type: %s" % type(item))
@since(1.3)
def __getattr__(self, name):
"""Returns the :class:`Column` denoted by ``name``.
>>> df.select(df.age).collect()
[Row(age=2), Row(age=5)]
"""
if name not in self.columns:
raise AttributeError(
"'%s' object has no attribute '%s'" % (self.__class__.__name__, name))
jc = self._jdf.apply(name)
return Column(jc)
@ignore_unicode_prefix
@since(1.3)
[docs] def select(self, *cols):
"""Projects a set of expressions and returns a new :class:`DataFrame`.
:param cols: list of column names (string) or expressions (:class:`Column`).
If one of the column names is '*', that column is expanded to include all columns
in the current DataFrame.
>>> df.select('*').collect()
[Row(age=2, name=u'Alice'), Row(age=5, name=u'Bob')]
>>> df.select('name', 'age').collect()
[Row(name=u'Alice', age=2), Row(name=u'Bob', age=5)]
>>> df.select(df.name, (df.age + 10).alias('age')).collect()
[Row(name=u'Alice', age=12), Row(name=u'Bob', age=15)]
"""
jdf = self._jdf.select(self._jcols(*cols))
return DataFrame(jdf, self.sql_ctx)
@since(1.3)
[docs] def selectExpr(self, *expr):
"""Projects a set of SQL expressions and returns a new :class:`DataFrame`.
This is a variant of :func:`select` that accepts SQL expressions.
>>> df.selectExpr("age * 2", "abs(age)").collect()
[Row((age * 2)=4, 'abs(age)=2), Row((age * 2)=10, 'abs(age)=5)]
"""
if len(expr) == 1 and isinstance(expr[0], list):
expr = expr[0]
jdf = self._jdf.selectExpr(self._jseq(expr))
return DataFrame(jdf, self.sql_ctx)
@ignore_unicode_prefix
@since(1.3)
[docs] def filter(self, condition):
"""Filters rows using the given condition.
:func:`where` is an alias for :func:`filter`.
:param condition: a :class:`Column` of :class:`types.BooleanType`
or a string of SQL expression.
>>> df.filter(df.age > 3).collect()
[Row(age=5, name=u'Bob')]
>>> df.where(df.age == 2).collect()
[Row(age=2, name=u'Alice')]
>>> df.filter("age > 3").collect()
[Row(age=5, name=u'Bob')]
>>> df.where("age = 2").collect()
[Row(age=2, name=u'Alice')]
"""
if isinstance(condition, basestring):
jdf = self._jdf.filter(condition)
elif isinstance(condition, Column):
jdf = self._jdf.filter(condition._jc)
else:
raise TypeError("condition should be string or Column")
return DataFrame(jdf, self.sql_ctx)
where = filter
@ignore_unicode_prefix
@since(1.3)
[docs] def groupBy(self, *cols):
"""Groups the :class:`DataFrame` using the specified columns,
so we can run aggregation on them. See :class:`GroupedData`
for all the available aggregate functions.
:func:`groupby` is an alias for :func:`groupBy`.
:param cols: list of columns to group by.
Each element should be a column name (string) or an expression (:class:`Column`).
>>> df.groupBy().avg().collect()
[Row(avg(age)=3.5)]
>>> df.groupBy('name').agg({'age': 'mean'}).collect()
[Row(name=u'Alice', avg(age)=2.0), Row(name=u'Bob', avg(age)=5.0)]
>>> df.groupBy(df.name).avg().collect()
[Row(name=u'Alice', avg(age)=2.0), Row(name=u'Bob', avg(age)=5.0)]
>>> df.groupBy(['name', df.age]).count().collect()
[Row(name=u'Bob', age=5, count=1), Row(name=u'Alice', age=2, count=1)]
"""
jgd = self._jdf.groupBy(self._jcols(*cols))
from pyspark.sql.group import GroupedData
return GroupedData(jgd, self.sql_ctx)
@since(1.4)
[docs] def rollup(self, *cols):
"""
Create a multi-dimensional rollup for the current :class:`DataFrame` using
the specified columns, so we can run aggregation on them.
>>> df.rollup('name', df.age).count().show()
+-----+----+-----+
| name| age|count|
+-----+----+-----+
|Alice|null| 1|
| Bob| 5| 1|
| Bob|null| 1|
| null|null| 2|
|Alice| 2| 1|
+-----+----+-----+
"""
jgd = self._jdf.rollup(self._jcols(*cols))
from pyspark.sql.group import GroupedData
return GroupedData(jgd, self.sql_ctx)
@since(1.4)
[docs] def cube(self, *cols):
"""
Create a multi-dimensional cube for the current :class:`DataFrame` using
the specified columns, so we can run aggregation on them.
>>> df.cube('name', df.age).count().show()
+-----+----+-----+
| name| age|count|
+-----+----+-----+
| null| 2| 1|
|Alice|null| 1|
| Bob| 5| 1|
| Bob|null| 1|
| null| 5| 1|
| null|null| 2|
|Alice| 2| 1|
+-----+----+-----+
"""
jgd = self._jdf.cube(self._jcols(*cols))
from pyspark.sql.group import GroupedData
return GroupedData(jgd, self.sql_ctx)
@since(1.3)
[docs] def agg(self, *exprs):
""" Aggregate on the entire :class:`DataFrame` without groups
(shorthand for ``df.groupBy.agg()``).
>>> df.agg({"age": "max"}).collect()
[Row(max(age)=5)]
>>> from pyspark.sql import functions as F
>>> df.agg(F.min(df.age)).collect()
[Row(min(age)=2)]
"""
return self.groupBy().agg(*exprs)
@since(1.3)
[docs] def unionAll(self, other):
""" Return a new :class:`DataFrame` containing union of rows in this
frame and another frame.
This is equivalent to `UNION ALL` in SQL.
"""
return DataFrame(self._jdf.unionAll(other._jdf), self.sql_ctx)
@since(1.3)
[docs] def intersect(self, other):
""" Return a new :class:`DataFrame` containing rows only in
both this frame and another frame.
This is equivalent to `INTERSECT` in SQL.
"""
return DataFrame(self._jdf.intersect(other._jdf), self.sql_ctx)
@since(1.3)
[docs] def subtract(self, other):
""" Return a new :class:`DataFrame` containing rows in this frame
but not in another frame.
This is equivalent to `EXCEPT` in SQL.
"""
return DataFrame(getattr(self._jdf, "except")(other._jdf), self.sql_ctx)
@since(1.4)
[docs] def dropDuplicates(self, subset=None):
"""Return a new :class:`DataFrame` with duplicate rows removed,
optionally only considering certain columns.
>>> from pyspark.sql import Row
>>> df = sc.parallelize([ \
Row(name='Alice', age=5, height=80), \
Row(name='Alice', age=5, height=80), \
Row(name='Alice', age=10, height=80)]).toDF()
>>> df.dropDuplicates().show()
+---+------+-----+
|age|height| name|
+---+------+-----+
| 5| 80|Alice|
| 10| 80|Alice|
+---+------+-----+
>>> df.dropDuplicates(['name', 'height']).show()
+---+------+-----+
|age|height| name|
+---+------+-----+
| 5| 80|Alice|
+---+------+-----+
"""
if subset is None:
jdf = self._jdf.dropDuplicates()
else:
jdf = self._jdf.dropDuplicates(self._jseq(subset))
return DataFrame(jdf, self.sql_ctx)
@since("1.3.1")
[docs] def dropna(self, how='any', thresh=None, subset=None):
"""Returns a new :class:`DataFrame` omitting rows with null values.
:func:`DataFrame.dropna` and :func:`DataFrameNaFunctions.drop` are aliases of each other.
:param how: 'any' or 'all'.
If 'any', drop a row if it contains any nulls.
If 'all', drop a row only if all its values are null.
:param thresh: int, default None
If specified, drop rows that have less than `thresh` non-null values.
This overwrites the `how` parameter.
:param subset: optional list of column names to consider.
>>> df4.na.drop().show()
+---+------+-----+
|age|height| name|
+---+------+-----+
| 10| 80|Alice|
+---+------+-----+
"""
if how is not None and how not in ['any', 'all']:
raise ValueError("how ('" + how + "') should be 'any' or 'all'")
if subset is None:
subset = self.columns
elif isinstance(subset, basestring):
subset = [subset]
elif not isinstance(subset, (list, tuple)):
raise ValueError("subset should be a list or tuple of column names")
if thresh is None:
thresh = len(subset) if how == 'any' else 1
return DataFrame(self._jdf.na().drop(thresh, self._jseq(subset)), self.sql_ctx)
@since("1.3.1")
[docs] def fillna(self, value, subset=None):
"""Replace null values, alias for ``na.fill()``.
:func:`DataFrame.fillna` and :func:`DataFrameNaFunctions.fill` are aliases of each other.
:param value: int, long, float, string, or dict.
Value to replace null values with.
If the value is a dict, then `subset` is ignored and `value` must be a mapping
from column name (string) to replacement value. The replacement value must be
an int, long, float, or string.
:param subset: optional list of column names to consider.
Columns specified in subset that do not have matching data type are ignored.
For example, if `value` is a string, and subset contains a non-string column,
then the non-string column is simply ignored.
>>> df4.na.fill(50).show()
+---+------+-----+
|age|height| name|
+---+------+-----+
| 10| 80|Alice|
| 5| 50| Bob|
| 50| 50| Tom|
| 50| 50| null|
+---+------+-----+
>>> df4.na.fill({'age': 50, 'name': 'unknown'}).show()
+---+------+-------+
|age|height| name|
+---+------+-------+
| 10| 80| Alice|
| 5| null| Bob|
| 50| null| Tom|
| 50| null|unknown|
+---+------+-------+
"""
if not isinstance(value, (float, int, long, basestring, dict)):
raise ValueError("value should be a float, int, long, string, or dict")
if isinstance(value, (int, long)):
value = float(value)
if isinstance(value, dict):
return DataFrame(self._jdf.na().fill(value), self.sql_ctx)
elif subset is None:
return DataFrame(self._jdf.na().fill(value), self.sql_ctx)
else:
if isinstance(subset, basestring):
subset = [subset]
elif not isinstance(subset, (list, tuple)):
raise ValueError("subset should be a list or tuple of column names")
return DataFrame(self._jdf.na().fill(value, self._jseq(subset)), self.sql_ctx)
@since(1.4)
[docs] def replace(self, to_replace, value, subset=None):
"""Returns a new :class:`DataFrame` replacing a value with another value.
:func:`DataFrame.replace` and :func:`DataFrameNaFunctions.replace` are
aliases of each other.
:param to_replace: int, long, float, string, or list.
Value to be replaced.
If the value is a dict, then `value` is ignored and `to_replace` must be a
mapping from column name (string) to replacement value. The value to be
replaced must be an int, long, float, or string.
:param value: int, long, float, string, or list.
Value to use to replace holes.
The replacement value must be an int, long, float, or string. If `value` is a
list or tuple, `value` should be of the same length with `to_replace`.
:param subset: optional list of column names to consider.
Columns specified in subset that do not have matching data type are ignored.
For example, if `value` is a string, and subset contains a non-string column,
then the non-string column is simply ignored.
>>> df4.na.replace(10, 20).show()
+----+------+-----+
| age|height| name|
+----+------+-----+
| 20| 80|Alice|
| 5| null| Bob|
|null| null| Tom|
|null| null| null|
+----+------+-----+
>>> df4.na.replace(['Alice', 'Bob'], ['A', 'B'], 'name').show()
+----+------+----+
| age|height|name|
+----+------+----+
| 10| 80| A|
| 5| null| B|
|null| null| Tom|
|null| null|null|
+----+------+----+
"""
if not isinstance(to_replace, (float, int, long, basestring, list, tuple, dict)):
raise ValueError(
"to_replace should be a float, int, long, string, list, tuple, or dict")
if not isinstance(value, (float, int, long, basestring, list, tuple)):
raise ValueError("value should be a float, int, long, string, list, or tuple")
rep_dict = dict()
if isinstance(to_replace, (float, int, long, basestring)):
to_replace = [to_replace]
if isinstance(to_replace, tuple):
to_replace = list(to_replace)
if isinstance(value, tuple):
value = list(value)
if isinstance(to_replace, list) and isinstance(value, list):
if len(to_replace) != len(value):
raise ValueError("to_replace and value lists should be of the same length")
rep_dict = dict(zip(to_replace, value))
elif isinstance(to_replace, list) and isinstance(value, (float, int, long, basestring)):
rep_dict = dict([(tr, value) for tr in to_replace])
elif isinstance(to_replace, dict):
rep_dict = to_replace
if subset is None:
return DataFrame(self._jdf.na().replace('*', rep_dict), self.sql_ctx)
elif isinstance(subset, basestring):
subset = [subset]
if not isinstance(subset, (list, tuple)):
raise ValueError("subset should be a list or tuple of column names")
return DataFrame(
self._jdf.na().replace(self._jseq(subset), self._jmap(rep_dict)), self.sql_ctx)
@since(1.4)
[docs] def corr(self, col1, col2, method=None):
"""
Calculates the correlation of two columns of a DataFrame as a double value.
Currently only supports the Pearson Correlation Coefficient.
:func:`DataFrame.corr` and :func:`DataFrameStatFunctions.corr` are aliases of each other.
:param col1: The name of the first column
:param col2: The name of the second column
:param method: The correlation method. Currently only supports "pearson"
"""
if not isinstance(col1, str):
raise ValueError("col1 should be a string.")
if not isinstance(col2, str):
raise ValueError("col2 should be a string.")
if not method:
method = "pearson"
if not method == "pearson":
raise ValueError("Currently only the calculation of the Pearson Correlation " +
"coefficient is supported.")
return self._jdf.stat().corr(col1, col2, method)
@since(1.4)
[docs] def cov(self, col1, col2):
"""
Calculate the sample covariance for the given columns, specified by their names, as a
double value. :func:`DataFrame.cov` and :func:`DataFrameStatFunctions.cov` are aliases.
:param col1: The name of the first column
:param col2: The name of the second column
"""
if not isinstance(col1, str):
raise ValueError("col1 should be a string.")
if not isinstance(col2, str):
raise ValueError("col2 should be a string.")
return self._jdf.stat().cov(col1, col2)
@since(1.4)
[docs] def crosstab(self, col1, col2):
"""
Computes a pair-wise frequency table of the given columns. Also known as a contingency
table. The number of distinct values for each column should be less than 1e4. At most 1e6
non-zero pair frequencies will be returned.
The first column of each row will be the distinct values of `col1` and the column names
will be the distinct values of `col2`. The name of the first column will be `$col1_$col2`.
Pairs that have no occurrences will have zero as their counts.
:func:`DataFrame.crosstab` and :func:`DataFrameStatFunctions.crosstab` are aliases.
:param col1: The name of the first column. Distinct items will make the first item of
each row.
:param col2: The name of the second column. Distinct items will make the column names
of the DataFrame.
"""
if not isinstance(col1, str):
raise ValueError("col1 should be a string.")
if not isinstance(col2, str):
raise ValueError("col2 should be a string.")
return DataFrame(self._jdf.stat().crosstab(col1, col2), self.sql_ctx)
@since(1.4)
[docs] def freqItems(self, cols, support=None):
"""
Finding frequent items for columns, possibly with false positives. Using the
frequent element count algorithm described in
"http://dx.doi.org/10.1145/762471.762473, proposed by Karp, Schenker, and Papadimitriou".
:func:`DataFrame.freqItems` and :func:`DataFrameStatFunctions.freqItems` are aliases.
.. note:: This function is meant for exploratory data analysis, as we make no \
guarantee about the backward compatibility of the schema of the resulting DataFrame.
:param cols: Names of the columns to calculate frequent items for as a list or tuple of
strings.
:param support: The frequency with which to consider an item 'frequent'. Default is 1%.
The support must be greater than 1e-4.
"""
if isinstance(cols, tuple):
cols = list(cols)
if not isinstance(cols, list):
raise ValueError("cols must be a list or tuple of column names as strings.")
if not support:
support = 0.01
return DataFrame(self._jdf.stat().freqItems(_to_seq(self._sc, cols), support), self.sql_ctx)
@ignore_unicode_prefix
@since(1.3)
[docs] def withColumn(self, colName, col):
"""
Returns a new :class:`DataFrame` by adding a column or replacing the
existing column that has the same name.
:param colName: string, name of the new column.
:param col: a :class:`Column` expression for the new column.
>>> df.withColumn('age2', df.age + 2).collect()
[Row(age=2, name=u'Alice', age2=4), Row(age=5, name=u'Bob', age2=7)]
"""
assert isinstance(col, Column), "col should be Column"
return DataFrame(self._jdf.withColumn(colName, col._jc), self.sql_ctx)
@ignore_unicode_prefix
@since(1.3)
[docs] def withColumnRenamed(self, existing, new):
"""Returns a new :class:`DataFrame` by renaming an existing column.
:param existing: string, name of the existing column to rename.
:param col: string, new name of the column.
>>> df.withColumnRenamed('age', 'age2').collect()
[Row(age2=2, name=u'Alice'), Row(age2=5, name=u'Bob')]
"""
return DataFrame(self._jdf.withColumnRenamed(existing, new), self.sql_ctx)
@since(1.4)
@ignore_unicode_prefix
[docs] def drop(self, col):
"""Returns a new :class:`DataFrame` that drops the specified column.
:param col: a string name of the column to drop, or a
:class:`Column` to drop.
>>> df.drop('age').collect()
[Row(name=u'Alice'), Row(name=u'Bob')]
>>> df.drop(df.age).collect()
[Row(name=u'Alice'), Row(name=u'Bob')]
>>> df.join(df2, df.name == df2.name, 'inner').drop(df.name).collect()
[Row(age=5, height=85, name=u'Bob')]
>>> df.join(df2, df.name == df2.name, 'inner').drop(df2.name).collect()
[Row(age=5, name=u'Bob', height=85)]
"""
if isinstance(col, basestring):
jdf = self._jdf.drop(col)
elif isinstance(col, Column):
jdf = self._jdf.drop(col._jc)
else:
raise TypeError("col should be a string or a Column")
return DataFrame(jdf, self.sql_ctx)
@since(1.3)
[docs] def toPandas(self):
"""Returns the contents of this :class:`DataFrame` as Pandas ``pandas.DataFrame``.
This is only available if Pandas is installed and available.
>>> df.toPandas() # doctest: +SKIP
age name
0 2 Alice
1 5 Bob
"""
import pandas as pd
return pd.DataFrame.from_records(self.collect(), columns=self.columns)
##########################################################################################
# Pandas compatibility
##########################################################################################
groupby = groupBy
drop_duplicates = dropDuplicates
# Having SchemaRDD for backward compatibility (for docs)
class SchemaRDD(DataFrame):
"""SchemaRDD is deprecated, please use :class:`DataFrame`.
"""
def _to_scala_map(sc, jm):
"""
Convert a dict into a JVM Map.
"""
return sc._jvm.PythonUtils.toScalaMap(jm)
[docs]class DataFrameNaFunctions(object):
"""Functionality for working with missing data in :class:`DataFrame`.
.. versionadded:: 1.4
"""
def __init__(self, df):
self.df = df
[docs] def drop(self, how='any', thresh=None, subset=None):
return self.df.dropna(how=how, thresh=thresh, subset=subset)
drop.__doc__ = DataFrame.dropna.__doc__
[docs] def fill(self, value, subset=None):
return self.df.fillna(value=value, subset=subset)
fill.__doc__ = DataFrame.fillna.__doc__
[docs] def replace(self, to_replace, value, subset=None):
return self.df.replace(to_replace, value, subset)
replace.__doc__ = DataFrame.replace.__doc__
[docs]class DataFrameStatFunctions(object):
"""Functionality for statistic functions with :class:`DataFrame`.
.. versionadded:: 1.4
"""
def __init__(self, df):
self.df = df
[docs] def corr(self, col1, col2, method=None):
return self.df.corr(col1, col2, method)
corr.__doc__ = DataFrame.corr.__doc__
[docs] def cov(self, col1, col2):
return self.df.cov(col1, col2)
cov.__doc__ = DataFrame.cov.__doc__
[docs] def crosstab(self, col1, col2):
return self.df.crosstab(col1, col2)
crosstab.__doc__ = DataFrame.crosstab.__doc__
[docs] def freqItems(self, cols, support=None):
return self.df.freqItems(cols, support)
freqItems.__doc__ = DataFrame.freqItems.__doc__
[docs] def sampleBy(self, col, fractions, seed=None):
return self.df.sampleBy(col, fractions, seed)
sampleBy.__doc__ = DataFrame.sampleBy.__doc__
def _test():
import doctest
from pyspark.context import SparkContext
from pyspark.sql import Row, SQLContext
import pyspark.sql.dataframe
globs = pyspark.sql.dataframe.__dict__.copy()
sc = SparkContext('local[4]', 'PythonTest')
globs['sc'] = sc
globs['sqlContext'] = SQLContext(sc)
globs['df'] = sc.parallelize([(2, 'Alice'), (5, 'Bob')])\
.toDF(StructType([StructField('age', IntegerType()),
StructField('name', StringType())]))
globs['df2'] = sc.parallelize([Row(name='Tom', height=80), Row(name='Bob', height=85)]).toDF()
globs['df3'] = sc.parallelize([Row(name='Alice', age=2),
Row(name='Bob', age=5)]).toDF()
globs['df4'] = sc.parallelize([Row(name='Alice', age=10, height=80),
Row(name='Bob', age=5, height=None),
Row(name='Tom', age=None, height=None),
Row(name=None, age=None, height=None)]).toDF()
(failure_count, test_count) = doctest.testmod(
pyspark.sql.dataframe, globs=globs,
optionflags=doctest.ELLIPSIS | doctest.NORMALIZE_WHITESPACE | doctest.REPORT_NDIFF)
globs['sc'].stop()
if failure_count:
exit(-1)
if __name__ == "__main__":
_test()
